Sequence Similarity Clusters for the Entities in PDB 1JQ3

Entity #1 | Chains: A,B,C,D
Spermidine synthase protein, length: 296 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 8642
95 % 2 2 8962 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.4
PDBFlex
90 % 2 2 8883
70 % 2 2 8544
50 % 2 2 7766
40 % 2 3 4960
30 % 9 36 501

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures