Sequence Similarity Clusters for the Entities in PDB 1JQ1

Entity #1 | Chains: A,B,C,D
VOLTAGE-GATED POTASSIUM CHANNEL protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 10473
95 % 1 2 10174
90 % 1 2 10042
70 % 1 2 9540
50 % 1 2 8229
40 % 1 2 7512
30 % 1 2 6531

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures