Sequence Similarity Clusters for the Entities in PDB 1JPX

Entity #1 | Chains: A,D,G
gp41 envelope protein protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 29333
95 % 1 1 24312
90 % 2 2 19829
70 % 2 2 18212
50 % 4 5 9071
40 % 5 12 2114
30 % 5 12 2030

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.