Sequence Similarity Clusters for the Entities in PDB 1JPV

Entity #1 | Chains: A,B,C
5'-deoxy-5'-methylthioadenosine phosphorylase protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 1167
95 % 4 9 1567 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 4 9 1598
70 % 4 9 1602
50 % 4 9 1656
40 % 4 9 1669
30 % 101 231 30

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures