Sequence Similarity Clusters for the Entities in PDB 1JPV

Entity #1 | Chains: A,B,C
5'-deoxy-5'-methylthioadenosine phosphorylase protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 1349
95 % 4 9 1589 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 4 9 1620
70 % 4 9 1633
50 % 4 9 1671
40 % 33 96 146
30 % 116 267 27

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures