Sequence Similarity Clusters for the Entities in PDB 1JPU

Entity #1 | Chains: A
glycerol dehydrogenase protein, length: 370 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 26524
95 % 2 3 22376 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 3 21725
70 % 2 3 19937
50 % 3 6 6237
40 % 3 7 3336
30 % 3 7 3132

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures