Sequence Similarity Clusters for the Entities in PDB 1JPU

Entity #1 | Chains: A
glycerol dehydrogenase protein, length: 370 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25920
95 % 2 3 21914 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 3 21297
70 % 2 3 19537
50 % 3 6 6113
40 % 3 7 3261
30 % 3 7 3060

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.