Sequence Similarity Clusters for the Entities in PDB 1JPS

Entity #1 | Chains: L
immunoglobulin Fab D3H44, light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 19384
95 % 2 4 13178
90 % 77 613 3
70 % 237 1704 2
50 % 586 4154 1
40 % 586 4155 1
30 % 632 4901 1
Entity #2 | Chains: H
immunoglobulin Fab D3H44, heavy chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 19037
95 % 2 3 16625
90 % 2 3 16287
70 % 286 2010 1
50 % 587 4154 1
40 % 587 4155 1
30 % 633 4901 1
Entity #3 | Chains: T
tissue factor protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 38 880
95 % 8 39 1171
90 % 8 39 1195
70 % 8 40 1167
50 % 8 40 1211
40 % 8 40 1225
30 % 8 40 1196

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.