Sequence Similarity Clusters for the Entities in PDB 1JPP

Entity #1 | Chains: A,B
BETA-CATENIN protein, length: 538 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 24 1501
95 % 23 24 1761 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.4
PDBFlex
90 % 23 24 1803
70 % 24 25 1727
50 % 24 25 1753
40 % 24 25 1720
30 % 27 28 1461
Entity #2 | Chains: C,D
ADENOMATOUS POLYPOSIS COLI PROTEIN protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures