Sequence Similarity Clusters for the Entities in PDB 1JPN

Entity #1 | Chains: A,B
SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 296 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 14 2036
95 % 6 19 1939 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.5
PDBFlex
90 % 6 19 1985
70 % 6 19 2003
50 % 6 19 2008
40 % 6 21 1739
30 % 12 51 655

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.