Sequence Similarity Clusters for the Entities in PDB 1JPN

Entity #1 | Chains: A,B
SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 296 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 14 2013
95 % 6 19 1919 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.5
PDBFlex
90 % 6 19 1966
70 % 6 19 1984
50 % 6 19 1991
40 % 6 21 1721
30 % 12 51 647

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.