Sequence Similarity Clusters for the Entities in PDB 1JPJ

Entity #1 | Chains: A
SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 296 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 14 1987
95 % 15 19 1904 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.5
PDBFlex
90 % 15 19 1950
70 % 15 19 1972
50 % 15 19 1975
40 % 15 21 1708
30 % 34 51 644

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.