Sequence Similarity Clusters for the Entities in PDB 1JPI

Entity #1 | Chains: A
UROPORPHYRINOGEN DECARBOXYLASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55253
95 % 17 19 3392 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 17 19 3445
70 % 17 19 3402
50 % 17 19 3321
40 % 21 26 1876
30 % 21 26 1815

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures