Sequence Similarity Clusters for the Entities in PDB 1JPC

Entity #1 | Chains: A
AGGLUTININ protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 10780
95 % 1 3 10790 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 3 10643
70 % 3 5 7108
50 % 5 20 1321
40 % 9 34 678
30 % 10 38 579

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.