Sequence Similarity Clusters for the Entities in PDB 1JPC

Entity #1 | Chains: A
AGGLUTININ protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 11040
95 % 1 3 11024 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 3 10876
70 % 3 5 7254
50 % 5 20 1356
40 % 9 34 697
30 % 10 38 586

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures