Sequence Similarity Clusters for the Entities in PDB 1JOW

Entity #1 | Chains: A
CYCLIN HOMOLOG protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 12589
95 % 6 6 12172 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.6
PDBFlex
90 % 6 6 12002
70 % 6 6 11337
50 % 6 6 10143
40 % 6 6 9208
30 % 7 7 6368
Entity #2 | Chains: B
CELL DIVISION PROTEIN KINASE 6 protein, length: 308 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 16 2780
95 % 16 16 3479 Flexibility: Low
Max RMSD: 8.1, Avg RMSD: 2.6
PDBFlex
90 % 16 16 3527
70 % 20 25 2106
50 % 20 25 2095
40 % 451 460 48
30 % 3796 3879 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.