Sequence Similarity Clusters for the Entities in PDB 1JOW

Entity #1 | Chains: A
CYCLIN HOMOLOG protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 12192
95 % 6 6 11790 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.5
PDBFlex
90 % 6 6 11623
70 % 6 6 10970
50 % 6 6 9842
40 % 6 6 8936
30 % 7 7 6180
Entity #2 | Chains: B
CELL DIVISION PROTEIN KINASE 6 protein, length: 308 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 16 2683
95 % 16 16 3372 Flexibility: Low
Max RMSD: 8.1, Avg RMSD: 2.8
PDBFlex
90 % 16 16 3416
70 % 20 25 2046
50 % 20 25 2028
40 % 451 460 41
30 % 3669 3751 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.