Sequence Similarity Clusters for the Entities in PDB 1JOT

Entity #1 | Chains: A
AGGLUTININ protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 5470
95 % 2 4 6105
90 % 2 4 6091
70 % 26 36 344
50 % 30 46 268
40 % 30 46 290
30 % 57 87 199
Entity #2 | Chains: B
AGGLUTININ protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71733
95 % 1 1 50096
90 % 1 1 47596
70 % 1 1 41863
50 % 1 1 35895
40 % 1 1 31730
30 % 1 1 26978

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.