Sequence Similarity Clusters for the Entities in PDB 1JOP

Entity #1 | Chains: A,B,C,D
Yhch protein protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 9831
95 % 2 2 9938 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 2 9823
70 % 2 2 9363
50 % 2 2 8460
40 % 2 2 7760
30 % 2 2 6839

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures