Sequence Similarity Clusters for the Entities in PDB 1JOJ

Entity #1 | Chains: A,B,C,D
CONCANAVALIN A protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 52 57 175
95 % 76 84 141
90 % 77 88 147
70 % 99 110 138
50 % 99 110 165
40 % 99 110 182
30 % 99 110 195
Entity #2 | Chains: P,Q,R,S
HEXAPEPTIDE protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.