Sequence Similarity Clusters for the Entities in PDB 1JOG

Entity #1 | Chains: A,B,C,D
HYPOTHETICAL PROTEIN HI0074 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23280
95 % 1 1 20029 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.1
PDBFlex
90 % 1 1 19485
70 % 1 1 17981
50 % 1 1 15597
40 % 1 1 13873
30 % 1 1 11871

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures