Sequence Similarity Clusters for the Entities in PDB 1JOC

Entity #1 | Chains: A,B
Early Endosomal Autoantigen 1 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45871
95 % 1 1 34393 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 2.6
PDBFlex
90 % 1 1 32857
70 % 1 1 29254
50 % 1 1 24974
40 % 1 1 21973
30 % 1 1 18601

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures