Sequence Similarity Clusters for the Entities in PDB 1JO0

Entity #1 | Chains: A,B
HYPOTHETICAL PROTEIN HI1333 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47899
95 % 1 1 35751 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 34139
70 % 1 2 21783
50 % 1 2 18843
40 % 1 3 14286
30 % 1 3 12227

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures