Sequence Similarity Clusters for the Entities in PDB 1JNY

Entity #1 | Chains: A,B
Elongation factor 1-alpha protein, length: 435 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 17643
95 % 2 2 16077 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.6
PDBFlex
90 % 2 2 15772
70 % 2 6 6096
50 % 5 17 2441
40 % 5 17 2415
30 % 12 93 398

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.