Sequence Similarity Clusters for the Entities in PDB 1JNW

Entity #1 | Chains: A
Pyridoxine 5'-phosphate oxidase protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 9462
95 % 2 7 9644 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.9
PDBFlex
90 % 2 7 9542
70 % 2 7 9117
50 % 2 7 8249
40 % 2 8 6109
30 % 2 8 5468

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures