Sequence Similarity Clusters for the Entities in PDB 1JNP

Entity #1 | Chains: A,B
T-CELL LEUKEMIA/LYMPHOMA PROTEIN 1A protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41819
95 % 1 1 35125 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 1 33571
70 % 1 1 29920
50 % 1 1 25520
40 % 1 1 22399
30 % 1 1 18675

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures