Sequence Similarity Clusters for the Entities in PDB 1JNN

Entity #1 | Chains: L
MONOCLONAL ANTI-ESTRADIOL 17E12E5 IMMUNOGLOBULIN KAPPA CHAIN protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41146
95 % 25 26 1032 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.9
PDBFlex
90 % 34 37 765
70 % 1944 2327 1
50 % 3944 4713 1
40 % 3944 4713 1
30 % 4690 5567 1
Entity #2 | Chains: H
MONOCLONAL ANTI-ESTRADIOL 17E12E5 IMMUNOGLOBULIN GAMMA-1 CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 40632
95 % 2 2 31022
90 % 2 2 29783
70 % 1905 2280 2
50 % 3945 4713 1
40 % 3945 4713 1
30 % 4691 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.