Sequence Similarity Clusters for the Entities in PDB 1JNN

Entity #1 | Chains: L
MONOCLONAL ANTI-ESTRADIOL 17E12E5 IMMUNOGLOBULIN KAPPA CHAIN protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42648
95 % 25 26 1073 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.9
PDBFlex
90 % 34 37 793
70 % 2069 2479 1
50 % 4198 5021 1
40 % 4198 5021 1
30 % 5017 5951 1
Entity #2 | Chains: H
MONOCLONAL ANTI-ESTRADIOL 17E12E5 IMMUNOGLOBULIN GAMMA-1 CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 42110
95 % 2 2 32092
90 % 2 2 30782
70 % 2027 2429 2
50 % 4199 5021 1
40 % 4199 5021 1
30 % 5018 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures