Sequence Similarity Clusters for the Entities in PDB 1JND

Entity #1 | Chains: A
Imaginal disc growth factor-2 protein, length: 420 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 34391
95 % 1 2 27647 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 2 26698
70 % 1 2 24177
50 % 1 2 20824
40 % 1 2 18495
30 % 8 104 343

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures