Sequence Similarity Clusters for the Entities in PDB 1JNB

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
UPPER COLLAR PROTEIN protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 1972
95 % 4 4 1447 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 4 4 1472
70 % 4 4 1488
50 % 4 4 1540
40 % 4 4 1522
30 % 4 4 1512

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures