Sequence Similarity Clusters for the Entities in PDB 1JNB

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
UPPER COLLAR PROTEIN protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 1598
95 % 4 4 1333 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 4 4 1358
70 % 4 4 1377
50 % 4 4 1429
40 % 4 4 1442
30 % 4 4 1420

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.