Sequence Similarity Clusters for the Entities in PDB 1JN9

Entity #1 | Chains: A,C
PUTATIVE L-ASPARAGINASE protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 10667
95 % 4 4 10354 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 4 4 10205
70 % 4 4 9674
50 % 4 4 8738
40 % 4 4 7942
30 % 4 4 6884
Entity #2 | Chains: B,D
PUTATIVE L-ASPARAGINASE protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 10668
95 % 4 4 10355 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 4 4 10206
70 % 4 4 9675
50 % 4 4 8739
40 % 4 4 7943
30 % 6 10 2888

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures