Sequence Similarity Clusters for the Entities in PDB 1JN9

Entity #1 | Chains: A,C
PUTATIVE L-ASPARAGINASE protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 8968
95 % 4 4 9135 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 4 4 9038
70 % 4 4 8629
50 % 4 4 7810
40 % 4 4 7169
30 % 4 4 6323
Entity #2 | Chains: B,D
PUTATIVE L-ASPARAGINASE protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9126
95 % 4 4 9279 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 4 4 9177
70 % 4 4 8754
50 % 4 4 7921
40 % 4 4 7266
30 % 6 10 2745

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.