Sequence Similarity Clusters for the Entities in PDB 1JN9

Entity #1 | Chains: A,C
PUTATIVE L-ASPARAGINASE protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9361
95 % 4 4 9536 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 4 4 9425
70 % 4 4 9004
50 % 4 4 8144
40 % 4 4 7473
30 % 4 4 6593
Entity #2 | Chains: B,D
PUTATIVE L-ASPARAGINASE protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9524
95 % 4 4 9682 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 4 4 9569
70 % 4 4 9133
50 % 4 4 8262
40 % 4 4 7576
30 % 6 10 2870

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures