Sequence Similarity Clusters for the Entities in PDB 1JN5

Entity #1 | Chains: A
p15 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 23465
95 % 2 3 20129 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 2 3 19572
70 % 2 3 18043
50 % 2 3 15655
40 % 2 3 13927
30 % 22 25 1122
Entity #2 | Chains: B
TAP protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39347
95 % 2 2 30377 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 29302
70 % 2 2 26390
50 % 2 2 22562
40 % 2 2 19864
30 % 2 2 16837
Entity #3 | Chains: C
FG-repeat protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures