Sequence Similarity Clusters for the Entities in PDB 1JN5

Entity #1 | Chains: A
p15 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 22955
95 % 2 3 19741 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 2 3 19211
70 % 2 3 17700
50 % 2 3 15374
40 % 2 3 13690
30 % 22 25 1105
Entity #2 | Chains: B
TAP protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 38568
95 % 2 2 29816 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 28780
70 % 2 2 25953
50 % 2 2 22193
40 % 2 2 19551
30 % 2 2 16585
Entity #3 | Chains: C
FG-repeat protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.