Sequence Similarity Clusters for the Entities in PDB 1JMZ

Entity #1 | Chains: A
Amine Dehydrogenase protein, length: 494 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 31244
95 % 2 2 25425
90 % 2 2 24591
70 % 2 2 22442
50 % 2 2 19444
40 % 4 4 11315
30 % 4 4 9834
Entity #2 | Chains: B
Amine Dehydrogenase protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 34069
95 % 2 2 27039 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 2 2 26133
70 % 2 2 23746
50 % 2 2 20452
40 % 2 2 18103
30 % 4 4 10169
Entity #3 | Chains: G
Amine Dehydrogenase protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 47028
95 % 2 2 35139 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 2 33592
70 % 2 2 29955
50 % 4 4 15721
40 % 4 4 14033
30 % 4 4 12003

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.