Sequence Similarity Clusters for the Entities in PDB 1JMZ

Entity #1 | Chains: A
Amine Dehydrogenase protein, length: 494 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 31812
95 % 2 2 25907
90 % 2 2 25042
70 % 2 2 22761
50 % 2 2 19688
40 % 4 4 11522
30 % 4 4 10018
Entity #2 | Chains: B
Amine Dehydrogenase protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 34658
95 % 2 2 27533 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 2 2 26594
70 % 2 2 24076
50 % 2 2 20703
40 % 2 2 18325
30 % 4 4 10359
Entity #3 | Chains: G
Amine Dehydrogenase protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 47697
95 % 2 2 35634 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 2 34049
70 % 2 2 30305
50 % 4 4 15966
40 % 4 4 14249
30 % 4 4 12188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.