Sequence Similarity Clusters for the Entities in PDB 1JMX

Entity #1 | Chains: A
Amine Dehydrogenase protein, length: 494 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 48353
95 % 1 2 40146 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 2 38232
70 % 1 2 33816
50 % 1 2 28742
40 % 2 4 15299
30 % 2 4 12830
Entity #2 | Chains: B
Amine Dehydrogenase protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 33942
95 % 1 2 40018 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 2 38111
70 % 1 2 33709
50 % 1 2 28659
40 % 1 2 25131
30 % 2 4 12829
Entity #3 | Chains: G
Amine Dehydrogenase protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 48345
95 % 1 2 40139 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 38225
70 % 1 2 33809
50 % 2 4 17623
40 % 2 4 15564
30 % 2 4 12722

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures