Sequence Similarity Clusters for the Entities in PDB 1JMX

Entity #1 | Chains: A
Amine Dehydrogenase protein, length: 494 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 31762
95 % 1 2 25866
90 % 1 2 25002
70 % 1 2 22723
50 % 1 2 19660
40 % 2 4 11505
30 % 2 4 10001
Entity #2 | Chains: B
Amine Dehydrogenase protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 34605
95 % 1 2 27491 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 2 26553
70 % 1 2 24038
50 % 1 2 20675
40 % 1 2 18298
30 % 2 4 10341
Entity #3 | Chains: G
Amine Dehydrogenase protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47627
95 % 1 2 35588 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 34004
70 % 1 2 30263
50 % 2 4 15943
40 % 2 4 14227
30 % 2 4 12168

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.