Sequence Similarity Clusters for the Entities in PDB 1JMW

Entity #1 | Chains: A
methyl-accepting chemotaxis protein II protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67333
95 % 1 5 11080 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 2.6
PDBFlex
90 % 1 5 10931
70 % 1 5 10375
50 % 1 6 8510
40 % 1 6 7800
30 % 1 6 6872

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures