Sequence Similarity Clusters for the Entities in PDB 1JMW

Entity #1 | Chains: A
methyl-accepting chemotaxis protein II protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 11385
95 % 1 5 10997 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 2.6
PDBFlex
90 % 1 5 10838
70 % 1 5 10245
50 % 1 6 8855
40 % 1 6 8036
30 % 1 6 6958

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures