Sequence Similarity Clusters for the Entities in PDB 1JMV

Entity #1 | Chains: A,B,C,D
Universal Stress Protein A protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24006
95 % 1 1 21319 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.9
PDBFlex
90 % 1 1 20683
70 % 1 1 18969
50 % 1 1 16423
40 % 1 1 14541
30 % 1 1 12192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures