Sequence Similarity Clusters for the Entities in PDB 1JMV

Entity #1 | Chains: A,B,C,D
Universal Stress Protein A protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23278
95 % 1 1 19992 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.9
PDBFlex
90 % 1 1 19448
70 % 1 1 17940
50 % 1 1 15571
40 % 1 1 13859
30 % 1 1 11863

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures