Sequence Similarity Clusters for the Entities in PDB 1JMT

Entity #1 | Chains: A
SPLICING FACTOR U2AF 35 KDA SUBUNIT protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70627
95 % 1 1 48648
90 % 1 1 46096
70 % 1 1 40366
50 % 1 1 34386
40 % 1 1 30331
30 % 1 1 25627
Entity #2 | Chains: B
SPLICING FACTOR U2AF 65 KDA SUBUNIT protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 2787
95 % 3 3 3443
90 % 3 3 3499
70 % 3 3 3468
50 % 3 3 3370
40 % 3 3 3268
30 % 3 3 3071

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures