Sequence Similarity Clusters for the Entities in PDB 1JMT

Entity #1 | Chains: A
SPLICING FACTOR U2AF 35 KDA SUBUNIT protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71524
95 % 1 1 49251
90 % 1 1 46646
70 % 1 1 40827
50 % 1 1 34774
40 % 1 1 30675
30 % 1 1 25919
Entity #2 | Chains: B
SPLICING FACTOR U2AF 65 KDA SUBUNIT protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 2818
95 % 3 3 3479
90 % 3 3 3546
70 % 3 3 3513
50 % 3 3 3420
40 % 3 3 3311
30 % 3 3 3115

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures