Sequence Similarity Clusters for the Entities in PDB 1JMS

Entity #1 | Chains: A
TERMINAL DEOXYNUCLEOTIDYLTRANSFERASE protein, length: 381 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 25 1639
95 % 17 34 1507 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 17 34 1538
70 % 17 34 1547
50 % 17 34 1580
40 % 39 58 954
30 % 267 434 105

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.