Sequence Similarity Clusters for the Entities in PDB 1JMQ

Entity #1 | Chains: A
65 KDA YES-ASSOCIATED PROTEIN protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73812
95 % 2 2 36793
90 % 2 2 35121
70 % 2 2 31221
50 % 2 2 26698
40 % 2 2 23573
30 % 2 2 20026
Entity #2 | Chains: P
WW Domain Binding Protein-1 protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures