Sequence Similarity Clusters for the Entities in PDB 1JMQ

Entity #1 | Chains: A
65 KDA YES-ASSOCIATED PROTEIN protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61858
95 % 2 2 35496
90 % 2 2 33914
70 % 2 2 30217
50 % 2 2 25754
40 % 2 2 22602
30 % 2 2 18840
Entity #2 | Chains: P
WW Domain Binding Protein-1 protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures