Sequence Similarity Clusters for the Entities in PDB 1JMI

Entity #1 | Chains: A
THYMIDYLATE SYNTHASE protein, length: 316 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 47 984
95 % 21 51 1059 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 21 51 1088
70 % 23 55 895
50 % 134 214 97
40 % 135 216 119
30 % 139 222 127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures