Sequence Similarity Clusters for the Entities in PDB 1JMB

Entity #1 | Chains: A,B,C
PROTEIN (FOUR-HELIX BUNDLE MODEL) protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 2749
95 % 3 8 1557
90 % 3 9 1480
70 % 4 14 1169
50 % 4 14 1208
40 % 4 14 1220
30 % 4 14 1194

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures