Sequence Similarity Clusters for the Entities in PDB 1JM4

Entity #1 | Chains: A
HIV-1 Tat Peptide protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
P300/CBP-associated Factor protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 9834
95 % 21 21 1417
90 % 21 21 1441
70 % 22 23 1341
50 % 22 23 1391
40 % 22 23 1413
30 % 454 455 41

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.