Sequence Similarity Clusters for the Entities in PDB 1JLY

Entity #1 | Chains: A,B
AGGLUTININ protein, length: 304 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 20129
95 % 1 2 17806 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 17443
70 % 1 2 16201
50 % 1 2 14176
40 % 1 2 12695
30 % 1 2 10929

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures