Sequence Similarity Clusters for the Entities in PDB 1JLU

Entity #1 | Chains: E
AMP-DEPENDENT PROTEIN KINASE, ALPHA-CATALYTIC SUBUNIT protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 41 67 515
95 % 177 253 123 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 0.9
PDBFlex
90 % 177 254 126
70 % 177 254 146
50 % 177 254 173
40 % 213 340 132
30 % 2032 4337 2
Entity #2 | Chains: S
CAMP-DEPENDENT PROTEIN KINASE INHIBITOR, MUSCLE/BRAIN FORM protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 117 161 179
95 % 117 161 222
90 % 117 161 232
70 % 117 161 253
50 % 117 161 280
40 % 117 161 311
30 % 117 161 321

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures