Sequence Similarity Clusters for the Entities in PDB 1JLU

Entity #1 | Chains: E
AMP-DEPENDENT PROTEIN KINASE, ALPHA-CATALYTIC SUBUNIT protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 36 60 537
95 % 125 198 140 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 0.9
PDBFlex
90 % 125 199 145
70 % 125 199 168
50 % 125 199 198
40 % 125 199 214
30 % 1807 3941 2
Entity #2 | Chains: S
CAMP-DEPENDENT PROTEIN KINASE INHIBITOR, MUSCLE/BRAIN FORM protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 24 2087
95 % 25 26 2331
90 % 108 152 233
70 % 108 152 267
50 % 108 152 286
40 % 108 152 302
30 % 108 152 308

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures