Sequence Similarity Clusters for the Entities in PDB 1JLU

Entity #1 | Chains: E
AMP-DEPENDENT PROTEIN KINASE, ALPHA-CATALYTIC SUBUNIT protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 36 60 549
95 % 165 240 127 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 0.9
PDBFlex
90 % 165 241 130
70 % 165 241 149
50 % 165 241 177
40 % 165 241 189
30 % 1905 4073 2
Entity #2 | Chains: S
CAMP-DEPENDENT PROTEIN KINASE INHIBITOR, MUSCLE/BRAIN FORM protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 24 2149
95 % 25 26 2403
90 % 109 153 238
70 % 109 153 270
50 % 109 153 290
40 % 109 153 312
30 % 109 153 318

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures