Sequence Similarity Clusters for the Entities in PDB 1JLT

Entity #1 | Chains: A
PHOSPHOLIPASE A2 INHIBITOR protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67458
95 % 1 4 14846 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 1 5 7932
70 % 1 6 5128
50 % 22 170 146
40 % 28 296 100
30 % 28 296 113
Entity #2 | Chains: B
PHOSPHOLIPASE A2 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15844
95 % 1 4 9756 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 1 5 6068
70 % 1 5 5919
50 % 23 170 146
40 % 29 296 100
30 % 29 296 113

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.