Sequence Similarity Clusters for the Entities in PDB 1JLT

Entity #1 | Chains: A
PHOSPHOLIPASE A2 INHIBITOR protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69614
95 % 1 4 15375 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 1 5 8217
70 % 1 6 5328
50 % 22 181 149
40 % 28 307 100
30 % 28 307 112
Entity #2 | Chains: B
PHOSPHOLIPASE A2 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16492
95 % 1 4 10100 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 1 5 6287
70 % 1 5 6124
50 % 23 181 149
40 % 29 307 100
30 % 29 307 112

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures