Sequence Similarity Clusters for the Entities in PDB 1JLQ

Entity #1 | Chains: A
HIV-1 RT, A-CHAIN protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 53 61 371
95 % 151 228 103
90 % 151 228 107
70 % 151 228 120
50 % 152 229 147
40 % 152 229 163
30 % 152 229 182
Entity #2 | Chains: B
HIV-1 RT, B-CHAIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 49 57 505
95 % 146 222 110
90 % 146 222 115
70 % 146 222 132
50 % 147 223 158
40 % 147 223 174
30 % 147 223 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.