Sequence Similarity Clusters for the Entities in PDB 1JLL

Entity #1 | Chains: A,D
succinyl-CoA synthetase alpha subunit protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 4946
95 % 8 11 2506 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 8 11 2566
70 % 8 11 2553
50 % 19 23 1461
40 % 19 23 1471
30 % 19 23 1441
Entity #2 | Chains: B,E
succinyl-CoA synthetase beta subunit protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34072
95 % 8 11 2456 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 8 11 2519
70 % 8 11 2506
50 % 8 11 2494
40 % 16 20 1601
30 % 16 20 1567

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures