Sequence Similarity Clusters for the Entities in PDB 1JLL

Entity #1 | Chains: A,D
succinyl-CoA synthetase alpha subunit protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 4683
95 % 8 11 2384 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 8 11 2445
70 % 8 11 2433
50 % 19 23 1406
40 % 19 23 1427
30 % 19 23 1398
Entity #2 | Chains: B,E
succinyl-CoA synthetase beta subunit protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32670
95 % 8 11 2334 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 8 11 2398
70 % 8 11 2385
50 % 8 11 2366
40 % 16 20 1544
30 % 16 20 1518

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.