Sequence Similarity Clusters for the Entities in PDB 1JLA

Entity #1 | Chains: A
HIV-1 RT A-chain protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 12559
95 % 40 223 104
90 % 40 223 109
70 % 40 223 123
50 % 41 224 149
40 % 41 224 165
30 % 41 224 181
Entity #2 | Chains: B
HIV-1 RT B-chain protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 12657
95 % 38 217 109
90 % 38 217 114
70 % 38 217 130
50 % 39 218 156
40 % 39 218 172
30 % 39 218 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.