Sequence Similarity Clusters for the Entities in PDB 1JLA

Entity #1 | Chains: A
HIV-1 RT A-chain protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 12896
95 % 43 228 104
90 % 43 228 108
70 % 43 228 122
50 % 44 229 149
40 % 44 229 166
30 % 44 229 183
Entity #2 | Chains: B
HIV-1 RT B-chain protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 12999
95 % 41 222 111
90 % 41 222 116
70 % 41 222 133
50 % 42 223 159
40 % 42 223 174
30 % 42 223 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.