Sequence Similarity Clusters for the Entities in PDB 1JLA

Entity #1 | Chains: A
HIV-1 RT A-chain protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 12700
95 % 41 224 104
90 % 41 224 109
70 % 41 224 123
50 % 42 225 150
40 % 42 225 168
30 % 42 225 183
Entity #2 | Chains: B
HIV-1 RT B-chain protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 12799
95 % 39 218 109
90 % 39 218 114
70 % 39 218 131
50 % 40 219 156
40 % 40 219 173
30 % 40 219 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.