Sequence Similarity Clusters for the Entities in PDB 1JL9

Entity #1 | Chains: A,B
EPIDERMAL GROWTH FACTOR protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 10428
95 % 2 6 8436 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.1
PDBFlex
90 % 2 6 8368
70 % 2 6 8059
50 % 4 22 2365
40 % 4 22 2335
30 % 4 22 2192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3E50 2 C, D Protransforming growth factor alpha UNP residues 40-89, Transforming growth factor alpha chain 9606
2 1MOX 2 C, D Transforming Growth Factor alpha 9606
3 1NQL 2 B epidermal growth factor 9606
4 1JL9 1 A, B EPIDERMAL GROWTH FACTOR RESIDUES 1-51 9606
5 1IVO 2 C, D Epidermal growth factor RESIDUES 1-53 9606
6 3NJP 2 C, D Epidermal growth factor 9606
7 2KV4 1 A Epidermal growth factor 9606
8 1P9J 1 A chimera of Epidermal growth factor(EGF) and Transforming growth factor alpha (TGF-alpha) TGF-alpha (residues 1-7), EGF (residues 8-54) 9606
9 1GK5 1 A Pro-epidermal growth factor,Protransforming growth factor alpha THE PROTEIN IS A CHIMERA OF EPIDERMAL GROWTH FACTOR RESIDUES 977-1018 AND HUMAN TRANSFORMING GROWTH FACTOR ALPHA RESIDUES 83-89,THE PROTEIN IS A CHIMERA OF EPIDERMAL GROWTH FACTOR RESIDUES 977-1018 AND HUMAN TRANSFORMING GROWTH FACTOR ALPHA RESIDUES 83-89 UNP residues 977-1018,UNP residues 83-89 10090
10 1IP0 1 A BETACELLULIN RESIDUES 62-111 9606
11 1IOX 1 A Betacellulin residues 62-111 9606
12 1YUF 1 A TRANSFORMING GROWTH FACTOR ALPHA 9606
13 1YUG 1 A TRANSFORMING GROWTH FACTOR ALPHA 9606
14 3EGF 1 A EPIDERMAL GROWTH FACTOR 10090
15 1EPG 1 A EPIDERMAL GROWTH FACTOR 10090
16 1EPH 1 A EPIDERMAL GROWTH FACTOR 10090
17 1EPI 1 A EPIDERMAL GROWTH FACTOR 10090
18 1EPJ 1 A EPIDERMAL GROWTH FACTOR 10090
19 1EGF 1 A EPIDERMAL GROWTH FACTOR 10090
20 2TGF 1 A TRANSFORMING GROWTH FACTOR-ALPHA 9606
21 3TGF 1 A TRANSFORMING GROWTH FACTOR-ALPHA 9606
22 4TGF 1 A DES-VAL-1,VAL-2,TRANSFORMING GROWTH FACTOR, ALPHA 9606