Sequence Similarity Clusters for the Entities in PDB 1JL5

Entity #1 | Chains: A
outer protein YopM protein, length: 454 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 32563
95 % 1 2 26360 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 2 25480
70 % 1 2 23147
50 % 1 2 19989
40 % 1 2 17787
30 % 1 2 15254

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.