Sequence Similarity Clusters for the Entities in PDB 1JL5

Entity #1 | Chains: A
outer protein YopM protein, length: 454 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 33242
95 % 1 2 26863 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 2 25946
70 % 1 2 23536
50 % 1 2 20324
40 % 1 2 18074
30 % 1 2 15491

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures