Sequence Similarity Clusters for the Entities in PDB 1JKY

Entity #1 | Chains: A
Lethal Factor protein, length: 776 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 5431
95 % 8 8 4193 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.1
PDBFlex
90 % 8 8 4220
70 % 8 8 4145
50 % 8 8 3995
40 % 8 8 3824
30 % 8 8 3542
Entity #2 | Chains: B
mitogen-activated protein kinase kinase 2 protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.