Sequence Similarity Clusters for the Entities in PDB 1JKU

Entity #1 | Chains: A,B,C,D,E,F
pseudocatalase protein, length: 266 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 4907
95 % 3 3 3484 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 3 3529
70 % 3 3 3491
50 % 3 3 3417
40 % 3 3 3307
30 % 3 3 3090

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.