Sequence Similarity Clusters for the Entities in PDB 1JKM

Entity #1 | Chains: A,B
BREFELDIN A ESTERASE protein, length: 361 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33794
95 % 1 1 29038 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 27895
70 % 1 1 25126
50 % 1 1 23097
40 % 6 10 1742
30 % 21 66 324

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures