Sequence Similarity Clusters for the Entities in PDB 1JKK

Entity #1 | Chains: A
DEATH-ASSOCIATED PROTEIN KINASE protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 37 854
95 % 40 49 908 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 2.2
PDBFlex
90 % 40 49 943
70 % 49 64 410
50 % 49 64 486
40 % 81 115 256
30 % 2493 3941 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures