Sequence Similarity Clusters for the Entities in PDB 1JKG

Entity #1 | Chains: A
p15 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 22421
95 % 1 3 19267 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 1 3 18747
70 % 1 3 17334
50 % 1 3 15069
40 % 1 3 13423
30 % 8 25 1077
Entity #2 | Chains: B
TAP protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 37725
95 % 1 2 29163 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 28155
70 % 1 2 25466
50 % 1 2 21820
40 % 1 2 19220
30 % 1 2 16303

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.