Sequence Similarity Clusters for the Entities in PDB 1JKD

Entity #1 | Chains: A
LYSOZYME protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57900
95 % 134 207 151 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 134 207 162
70 % 545 1008 7
50 % 545 1017 8
40 % 548 1052 10
30 % 548 1052 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures