Sequence Similarity Clusters for the Entities in PDB 1JKD

Entity #1 | Chains: A
LYSOZYME protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59222
95 % 134 207 155 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 134 207 167
70 % 554 1020 7
50 % 554 1029 8
40 % 557 1064 10
30 % 557 1064 21

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures